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When auto-compacting, the reftable library packs references such that
the sizes of the tables form a geometric sequence. The factor for this
geometric sequence is hardcoded to 2 right now. We're about to expose
this as a config option though, so let's expose the factor via write
options.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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We sometimes pass the refatble write options as value and sometimes as a
pointer. This is quite confusing and makes the reader wonder whether the
options get modified sometimes.
In fact, `reftable_new_writer()` does cause the caller-provided options
to get updated when some values aren't set up. This is quite unexpected,
but didn't cause any harm until now.
Adapt the code so that we do not modify the caller-provided values
anymore. While at it, refactor the code to code to consistently pass the
options as a constant pointer to clarify that the caller-provided opts
will not ever get modified.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Throughout the reftable library the `reftable_write_options` are
sometimes referred to as `cfg` and sometimes as `opts`. Unify these to
consistently use `opts` to avoid confusion.
While at it, touch up the coding style a bit by removing unneeded braces
around one-line statements and newlines between variable declarations.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Code to write out reftable has seen some optimization and
simplification.
* ps/reftable-write-optim:
reftable/block: reuse compressed array
reftable/block: reuse zstream when writing log blocks
reftable/writer: reset `last_key` instead of releasing it
reftable/writer: unify releasing memory
reftable/writer: refactorings for `writer_flush_nonempty_block()`
reftable/writer: refactorings for `writer_add_record()`
refs/reftable: don't recompute committer ident
reftable: remove name checks
refs/reftable: skip duplicate name checks
refs/reftable: perform explicit D/F check when writing symrefs
refs/reftable: fix D/F conflict error message on ref copy
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The strategy to compact multiple tables of reftables after many
operations accumulate many entries has been improved to avoid
accumulating too many tables uncollected.
* jt/reftable-geometric-compaction:
reftable/stack: use geometric table compaction
reftable/stack: add env to disable autocompaction
reftable/stack: expose option to disable auto-compaction
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"git pack-refs" learned the "--auto" option, which is a useful
addition to be triggered from "git gc --auto".
Acked-by: Karthik Nayak <karthik.188@gmail.com>
cf. <CAOLa=ZRAEA7rSUoYL0h-2qfEELdbPHbeGpgBJRqesyhHi9Q6WQ@mail.gmail.com>
* ps/pack-refs-auto:
builtin/gc: pack refs when using `git maintenance run --auto`
builtin/gc: forward git-gc(1)'s `--auto` flag when packing refs
t6500: extract objects with "17" prefix
builtin/gc: move `struct maintenance_run_opts`
builtin/pack-refs: introduce new "--auto" flag
builtin/pack-refs: release allocated memory
refs/reftable: expose auto compaction via new flag
refs: remove `PACK_REFS_ALL` flag
refs: move `struct pack_refs_opts` to where it's used
t/helper: drop pack-refs wrapper
refs/reftable: print errors on compaction failure
reftable/stack: gracefully handle failed auto-compaction due to locks
reftable/stack: use error codes when locking fails during compaction
reftable/error: discern locked/outdated errors
reftable/stack: fix error handling in `reftable_stack_init_addition()`
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In the preceding commit we have disabled name checks in the "reftable"
backend. These checks were responsible for verifying multiple things
when writing records to the reftable stack:
- Detecting file/directory conflicts. Starting with the preceding
commits this is now handled by the reftable backend itself via
`refs_verify_refname_available()`.
- Validating refnames. This is handled by `check_refname_format()` in
the generic ref transacton layer.
The code in the reftable library is thus not used anymore and likely to
bitrot over time. Remove it.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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To reduce the number of on-disk reftables, compaction is performed.
Contiguous tables with the same binary log value of size are grouped
into segments. The segment that has both the lowest binary log value and
contains more than one table is set as the starting point when
identifying the compaction segment.
Since segments containing a single table are not initially considered
for compaction, if the table appended to the list does not match the
previous table log value, no compaction occurs for the new table. It is
therefore possible for unbounded growth of the table list. This can be
demonstrated by repeating the following sequence:
git branch -f foo
git branch -d foo
Each operation results in a new table being written with no compaction
occurring until a separate operation produces a table matching the
previous table log value.
Instead, to avoid unbounded growth of the table list, the compaction
strategy is updated to ensure tables follow a geometric sequence after
each operation by individually evaluating each table in reverse index
order. This strategy results in a much simpler and more robust algorithm
compared to the previous one while also maintaining a minimal ordered
set of tables on-disk.
When creating 10 thousand references, the new strategy has no
performance impact:
Benchmark 1: update-ref: create refs sequentially (revision = HEAD~)
Time (mean ± σ): 26.516 s ± 0.047 s [User: 17.864 s, System: 8.491 s]
Range (min … max): 26.447 s … 26.569 s 10 runs
Benchmark 2: update-ref: create refs sequentially (revision = HEAD)
Time (mean ± σ): 26.417 s ± 0.028 s [User: 17.738 s, System: 8.500 s]
Range (min … max): 26.366 s … 26.444 s 10 runs
Summary
update-ref: create refs sequentially (revision = HEAD) ran
1.00 ± 0.00 times faster than update-ref: create refs sequentially (revision = HEAD~)
Some tests in `t0610-reftable-basics.sh` assert the on-disk state of
tables and are therefore updated to specify the correct new table count.
Since compaction is more aggressive in ensuring tables maintain a
geometric sequence, the expected table count is reduced in these tests.
In `reftable/stack_test.c` tests related to `sizes_to_segments()` are
removed because the function is no longer needed. Also, the
`test_suggest_compaction_segment()` test is updated to better showcase
and reflect the new geometric compaction behavior.
Signed-off-by: Justin Tobler <jltobler@gmail.com>
Acked-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The reftable stack already has a variable to configure whether or not to
run auto-compaction, but it is inaccessible to users of the library.
There exist use cases where a caller may want to have more control over
auto-compaction.
Move the `disable_auto_compact` option into `reftable_write_options` to
allow external callers to disable auto-compaction. This will be used in
a subsequent commit.
Signed-off-by: Justin Tobler <jltobler@gmail.com>
Acked-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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* ps/pack-refs-auto:
builtin/gc: pack refs when using `git maintenance run --auto`
builtin/gc: forward git-gc(1)'s `--auto` flag when packing refs
t6500: extract objects with "17" prefix
builtin/gc: move `struct maintenance_run_opts`
builtin/pack-refs: introduce new "--auto" flag
builtin/pack-refs: release allocated memory
refs/reftable: expose auto compaction via new flag
refs: remove `PACK_REFS_ALL` flag
refs: move `struct pack_refs_opts` to where it's used
t/helper: drop pack-refs wrapper
refs/reftable: print errors on compaction failure
reftable/stack: gracefully handle failed auto-compaction due to locks
reftable/stack: use error codes when locking fails during compaction
reftable/error: discern locked/outdated errors
reftable/stack: fix error handling in `reftable_stack_init_addition()`
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A unit test for reftable code tried to enumerate all files in a
directory after reftable operations and expected to see nothing but
the files it wanted to leave there, but was fooled by .nfs* cruft
files left, which has been corrected.
* ps/reftable-unit-test-nfs-workaround:
reftable: fix tests being broken by NFS' delete-after-close semantics
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Whenever we commit a new table to the reftable stack we will end up
invoking auto-compaction of the stack to keep the total number of tables
at bay. This auto-compaction may fail though in case at least one of the
tables which we are about to compact is locked. This is indicated by the
compaction function returning `REFTABLE_LOCK_ERROR`. We do not handle
this case though, and thus bubble that return value up the calling
chain, which will ultimately cause a failure.
Fix this bug by ignoring `REFTABLE_LOCK_ERROR`.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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We currently throw two different errors into a similar-but-different
error code:
- Errors when trying to lock the reftable stack.
- Errors when trying to write to the reftable stack which has been
modified concurrently.
This results in unclear error handling and user-visible error messages.
Create a new `REFTABLE_OUTDATED_ERROR` so that those error conditions
can be clearly told apart from each other. Adjust users of the old
`REFTABLE_LOCK_ERROR` to use the new error code as required.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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It was reported that the reftable unit tests in t0032 fail with the
following assertion when running on top of NFS:
running test_reftable_stack_compaction_concurrent_clean
reftable/stack_test.c: 1063: failed assertion count_dir_entries(dir) == 2
Aborted
Setting a breakpoint immediately before the assertion in fact shows the
following list of files:
./stack_test-1027.QJBpnd
./stack_test-1027.QJBpnd/0x000000000001-0x000000000003-dad7ac80.ref
./stack_test-1027.QJBpnd/.nfs000000000001729f00001e11
./stack_test-1027.QJBpnd/tables.list
Note the weird ".nfs*" file? This file is maintained by NFS clients in
order to emulate delete-after-last-close semantics that we rely on in
the reftable code [1]. Instead of unlinking the file right away and
keeping it open in the client, the NFS client will rename it to ".nfs*"
and then delete that temporary file when the last reference to it gets
dropped. Quoting the NFS FAQ:
> D2. What is a "silly rename"? Why do these .nfsXXXXX files keep
> showing up?
>
> A. Unix applications often open a scratch file and then unlink it.
> They do this so that the file is not visible in the file system name
> space to any other applications, and so that the system will
> automatically clean up (delete) the file when the application exits.
> This is known as "delete on last close", and is a tradition among
> Unix applications.
>
> Because of the design of the NFS protocol, there is no way for a
> file to be deleted from the name space but still remain in use by an
> application. Thus NFS clients have to emulate this using what
> already exists in the protocol. If an open file is unlinked, an NFS
> client renames it to a special name that looks like ".nfsXXXXX".
> This "hides" the file while it remains in use. This is known as a
> "silly rename." Note that NFS servers have nothing to do with this
> behavior.
This of course throws off the assertion that we got exactly two files in
that directory.
The test in question triggers this behaviour by holding two open file
descriptors to the "tables.list" file. One of the references is because
we are about to append to the stack, whereas the other reference is
because we want to compact it. As the compaction has just finished we
already rewrote "tables.list" to point to the new contents, but the
other file descriptor pointing to the old version is still open. Thus we
trigger the delete-after-last-close emulation.
Furthermore, it was reported that this behaviour only triggers with
4f36b8597c (reftable/stack: fix race in up-to-date check, 2024-01-18).
This is expected as well because it is the first point in time where we
actually keep the "tables.list" file descriptor open for the stat cache.
Fix this bug by skipping over any files that start with a leading dot
when counting files. While we could explicitly check for a prefix of
".nfs", other network file systems like SMB for example do the same
trickery but with a ".smb" prefix. In any case though, this loosening of
the assertion should be fine given that the reftable library would never
write files with leading dots by itself.
[1]: https://nfs.sourceforge.net/#faq_d2
Reported-by: Chuck Lever <chuck.lever@oracle.com>
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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In 7af607c58d (reftable/record: store "val1" hashes as static arrays,
2024-01-03) and b31e3cc620 (reftable/record: store "val2" hashes as
static arrays, 2024-01-03) we have converted ref records to store their
object IDs in a static array. Convert log records to do the same so that
their old and new object IDs are arrays, too.
This change results in two allocations less per log record that we're
iterating over. Before:
HEAP SUMMARY:
in use at exit: 13,473 bytes in 122 blocks
total heap usage: 8,068,495 allocs, 8,068,373 frees, 401,011,862 bytes allocated
After:
HEAP SUMMARY:
in use at exit: 13,473 bytes in 122 blocks
total heap usage: 6,068,489 allocs, 6,068,367 frees, 361,011,822 bytes allocated
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Code clean-up in various reftable code paths.
* ps/reftable-styles:
reftable/record: improve semantics when initializing records
reftable/merged: refactor initialization of iterators
reftable/merged: refactor seeking of records
reftable/stack: use `size_t` to track stack length
reftable/stack: use `size_t` to track stack slices during compaction
reftable/stack: index segments with `size_t`
reftable/stack: fix parameter validation when compacting range
reftable: introduce macros to allocate arrays
reftable: introduce macros to grow arrays
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Remove unused header "#include".
* en/header-cleanup:
treewide: remove unnecessary includes in source files
treewide: add direct includes currently only pulled in transitively
trace2/tr2_tls.h: remove unnecessary include
submodule-config.h: remove unnecessary include
pkt-line.h: remove unnecessary include
line-log.h: remove unnecessary include
http.h: remove unnecessary include
fsmonitor--daemon.h: remove unnecessary includes
blame.h: remove unnecessary includes
archive.h: remove unnecessary include
treewide: remove unnecessary includes in source files
treewide: remove unnecessary includes from header files
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We use `int`s to index into arrays of segments and track the length of
them, which is considered to be a code smell in the Git project. Convert
the code to use `size_t` instead.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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When creating a new compacted table from a range of preexisting ones we
don't set the default permissions on the resulting table when specified
by the user. This has the effect that the "core.sharedRepository" config
will not be honored correctly.
Fix this bug and add a test to catch this issue. Note that we only test
on non-Windows platforms because Windows does not use POSIX permissions
natively.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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More fixes and optimizations to the reftable backend.
* ps/reftable-fixes-and-optims:
reftable/merged: transfer ownership of records when iterating
reftable/merged: really reuse buffers to compute record keys
reftable/record: store "val2" hashes as static arrays
reftable/record: store "val1" hashes as static arrays
reftable/record: constify some parts of the interface
reftable/writer: fix index corruption when writing multiple indices
reftable/stack: do not auto-compact twice in `reftable_stack_add()`
reftable/stack: do not overwrite errors when compacting
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Remove unused header "#include".
* en/header-cleanup:
treewide: remove unnecessary includes in source files
treewide: add direct includes currently only pulled in transitively
trace2/tr2_tls.h: remove unnecessary include
submodule-config.h: remove unnecessary include
pkt-line.h: remove unnecessary include
line-log.h: remove unnecessary include
http.h: remove unnecessary include
fsmonitor--daemon.h: remove unnecessary includes
blame.h: remove unnecessary includes
archive.h: remove unnecessary include
treewide: remove unnecessary includes in source files
treewide: remove unnecessary includes from header files
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When reading ref records of type "val1", we store its object ID in an
allocated array. This results in an additional allocation for every
single ref record we read, which is rather inefficient especially when
iterating over refs.
Refactor the code to instead use an embedded array of `GIT_MAX_RAWSZ`
bytes. While this means that `struct ref_record` is bigger now, we
typically do not store all refs in an array anyway and instead only
handle a limited number of records at the same point in time.
Using `git show-ref --quiet` in a repository with ~350k refs this leads
to a significant drop in allocations. Before:
HEAP SUMMARY:
in use at exit: 21,098 bytes in 192 blocks
total heap usage: 2,116,683 allocs, 2,116,491 frees, 76,098,060 bytes allocated
After:
HEAP SUMMARY:
in use at exit: 21,098 bytes in 192 blocks
total heap usage: 1,419,031 allocs, 1,418,839 frees, 62,145,036 bytes allocated
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Each of these were checked with
gcc -E -I. ${SOURCE_FILE} | grep ${HEADER_FILE}
to ensure that removing the direct inclusion of the header actually
resulted in that header no longer being included at all (i.e. that
no other header pulled it in transitively).
...except for a few cases where we verified that although the header
was brought in transitively, nothing from it was directly used in
that source file. These cases were:
* builtin/credential-cache.c
* builtin/pull.c
* builtin/send-pack.c
Signed-off-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Whenever updating references or reflog entries in the reftable stack, we
need to add a new table to the stack, thus growing the stack's length by
one. The stack can grow to become quite long rather quickly, leading to
performance issues when trying to read records. But besides performance
issues, this can also lead to exhaustion of file descriptors very
rapidly as every single table requires a separate descriptor when
opening the stack.
While git-pack-refs(1) fixes this issue for us by merging the tables, it
runs too irregularly to keep the length of the stack within reasonable
limits. This is why the reftable stack has an auto-compaction mechanism:
`reftable_stack_add()` will call `reftable_stack_auto_compact()` after
its added the new table, which will auto-compact the stack as required.
But while this logic works alright for `reftable_stack_add()`, we do not
do the same in `reftable_addition_commit()`, which is the transactional
equivalent to the former function that allows us to write multiple
updates to the stack atomically. Consequentially, we will easily run
into file descriptor exhaustion in code paths that use many separate
transactions like e.g. non-atomic fetches.
Fix this issue by calling `reftable_stack_auto_compact()`.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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While we have several tests that check whether we correctly perform
auto-compaction when manually calling `reftable_stack_auto_compact()`,
we don't have any tests that verify whether `reftable_stack_add()` does
call it automatically. Add one.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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There are calls to write(3P) where we don't properly handle interrupts.
Convert them to use `write_in_full()`.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Introduce and apply coccinelle rule to discourage an explicit
comparison between a pointer and NULL, and applies the clean-up to
the maintenance track.
* ep/maint-equals-null-cocci:
tree-wide: apply equals-null.cocci
tree-wide: apply equals-null.cocci
contrib/coccinnelle: add equals-null.cocci
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Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Problems identified by Coverity in the reftable code have been
corrected.
* hn/reftable-coverity-fixes:
reftable: add print functions to the record types
reftable: make reftable_record a tagged union
reftable: remove outdated file reftable.c
reftable: implement record equality generically
reftable: make reftable-record.h function signatures const correct
reftable: handle null refnames in reftable_ref_record_equal
reftable: drop stray printf in readwrite_test
reftable: order unittests by complexity
reftable: all xxx_free() functions accept NULL arguments
reftable: fix resource warning
reftable: ignore remove() return value in stack_test.c
reftable: check reftable_stack_auto_compact() return value
reftable: fix resource leak blocksource.c
reftable: fix resource leak in block.c error path
reftable: fix OOB stack write in print functions
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If the cleanup fails, there is nothing we can do.
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Fixes a problem detected by Coverity.
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Create files with mode 0666, so umask works as intended. Provides an override,
which is useful to support shared repos (test t1301-shared-repo.sh).
Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Signed-off-by: Han-Wen Nienhuys <hanwen@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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