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* tg/index-v4-format:
read-cache: add index.version config variable
test-lib: allow setting the index format version
introduce GIT_INDEX_VERSION environment variable
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Borrow the bitmap index into packfiles from JGit to speed up
enumeration of objects involved in a commit range without having to
fully traverse the history.
* jk/pack-bitmap: (26 commits)
ewah: unconditionally ntohll ewah data
ewah: support platforms that require aligned reads
read-cache: use get_be32 instead of hand-rolled ntoh_l
block-sha1: factor out get_be and put_be wrappers
do not discard revindex when re-preparing packfiles
pack-bitmap: implement optional name_hash cache
t/perf: add tests for pack bitmaps
t: add basic bitmap functionality tests
count-objects: recognize .bitmap in garbage-checking
repack: consider bitmaps when performing repacks
repack: handle optional files created by pack-objects
repack: turn exts array into array-of-struct
repack: stop using magic number for ARRAY_SIZE(exts)
pack-objects: implement bitmap writing
rev-list: add bitmap mode to speed up object lists
pack-objects: use bitmaps when packing objects
pack-objects: split add_object_entry
pack-bitmap: add support for bitmap indexes
documentation: add documentation for the bitmap format
ewah: compressed bitmap implementation
...
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* nd/reset-intent-to-add:
reset: support "--mixed --intent-to-add" mode
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Allow "git cmd path/", when the 'path' is where a submodule is
bound to the top-level working tree, to match 'path', despite the
extra and unnecessary trailing slash.
* nd/submodule-pathspec-ending-with-slash:
clean: use cache_name_is_other()
clean: replace match_pathspec() with dir_path_match()
pathspec: pass directory indicator to match_pathspec_item()
match_pathspec: match pathspec "foo/" against directory "foo"
dir.c: prepare match_pathspec_item for taking more flags
pathspec: rename match_pathspec_depth() to match_pathspec()
pathspec: convert some match_pathspec_depth() to dir_path_match()
pathspec: convert some match_pathspec_depth() to ce_path_match()
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Allow "merge-recursive" to work in an empty (temporary) working
tree again when there are renames involved, correcting an old
regression in 1.7.7 era.
* bk/refresh-missing-ok-in-merge-recursive:
merge-recursive.c: tolerate missing files while refreshing index
read-cache.c: extend make_cache_entry refresh flag with options
read-cache.c: refactor --ignore-missing implementation
t3030-merge-recursive: test known breakage with empty work tree
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This helps reduce the number of match_pathspec_depth() call sites and
show how match_pathspec_depth() is used.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Convert the make_cache_entry boolean 'refresh' argument to a more
general 'refresh_options' argument. Pass the value through to the
underlying refresh_cache_ent call. Add option CE_MATCH_REFRESH to
enable stat refresh. Update call sites to use the new signature.
Signed-off-by: Brad King <brad.king@kitware.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Move lstat ENOENT handling from refresh_index to refresh_cache_ent and
activate it with a new CE_MATCH_IGNORE_MISSING option. This will allow
other call paths into refresh_cache_ent to use the feature.
Signed-off-by: Brad King <brad.king@kitware.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Add a config variable that allows setting the default index version when
initializing a new index file. Similar to the GIT_INDEX_VERSION
environment variable this only affects new index files.
Signed-off-by: Thomas Gummerer <t.gummerer@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Respect a GIT_INDEX_VERSION environment variable, when a new index is
initialized. Setting the environment variable will not cause existing
index files to be converted to another format, but will only affect
newly written index files. This can be used to initialize repositories
with index-v4.
Helped-by: Junio C Hamano <gitster@pobox.com>
Signed-off-by: Thomas Gummerer <t.gummerer@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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When --mixed is used, entries could be removed from index if the
target ref does not have them. When "reset" is used in preparation for
commit spliting (in a dirty worktree), it could be hard to track what
files to be added back. The new option --intent-to-add simplifies it
by marking all removed files intent-to-add.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
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Commit d60c49c (read-cache.c: allow unaligned mapping of the
index file, 2012-04-03) introduced helpers to access
unaligned data. However, we already have get_be32, which has
a few advantages:
1. It's already written, so we avoid duplication.
2. It's probably faster, since it does the endian
conversion and the alignment fix at the same time.
3. The get_be32 code is well-tested, having been in
block-sha1 for a long time. By contrast, our custom
helpers were probably almost never used, since the user
needed to manually define a macro to enable them.
We have to add a get_be16 implementation to the existing
get_be32, but that is very simple to do.
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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When cache_entry structs are removed from index_state.cache, they are not
properly freed. Freeing those entries wasn't possible before because we
couldn't remove them from index_state.name_hash.
Now that we _do_ remove the entries from name_hash, we can also free them.
Add 'free(cache_entry)' to all call sites of name-hash.c::remove_name_hash
in read-cache.c (we could free() directly in remove_name_hash(), but
name-hash.c isn't concerned with cache_entry allocation at all).
Accessing a cache_entry after removing it from the index is now no longer
allowed, as the memory has been freed. The following functions need minor
fixes (typically by copying ce->name before use):
- builtin/rm.c::cmd_rm
- builtin/update-index.c::do_reupdate
- read-cache.c::read_index_unmerged
- resolve-undo.c::unmerge_index_entry_at
Signed-off-by: Karsten Blees <blees@dcon.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The new hashmap implementation supports remove, so really remove unused
cache entries from the name hashmap instead of just marking them.
The CE_UNHASHED flag and CE_STATE_MASK are no longer needed.
Keep the CE_HASHED flag to prevent adding entries twice.
Signed-off-by: Karsten Blees <blees@dcon.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Clean up the internal of the name-hash mechanism used to work
around case insensitivity on some filesystems to cleanly fix a
long-standing API glitch where the caller of cache_name_exists()
that ask about a directory with a counted string was required to
have '/' at one location past the end of the string.
* es/name-hash-no-trailing-slash-in-dirs:
dir: revert work-around for retired dangerous behavior
name-hash: stop storing trailing '/' on paths in index_state.dir_hash
employ new explicit "exists in index?" API
name-hash: refactor polymorphic index_name_exists()
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Earlier we started rejecting an attempt to add 0{40} object name to
the index and to tree objects, but it sometimes is necessary to
allow so to be able to use tools like filter-branch to correct such
broken tree objects.
* jk/write-broken-index-with-nul-sha1:
write_index: optionally allow broken null sha1s
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When 5102c617 (Add case insensitivity support for directories when using
git status, 2010-10-03) added directories to the name-hash there was
only a single hash table in which both real cache entries and leading
directory prefixes were registered. To distinguish between the two types
of entries, directories were stored with a trailing '/'.
2092678c (name-hash.c: fix endless loop with core.ignorecase=true,
2013-02-28), however, moved directories to a separate hash table
(index_state.dir_hash) but retained the (now) redundant trailing '/',
thus callers continue to bear the burden of ensuring the slash's
presence before searching the index for a directory. Eliminate this
redundancy by storing paths in the dir-hash without the trailing '/'.
An important benefit of this change is that it eliminates undocumented
and dangerous behavior of dir.c:directory_exists_in_index_icase() in
which it assumes not only that it can validly access one character
beyond the end of its incoming directory argument, but also that that
character will unconditionally be a '/'. This perilous behavior was
"tolerated" because the string passed in by its lone caller always had a
'/' in that position, however, things broke [1] when 2eac2a4c (ls-files
-k: a directory only can be killed if the index has a non-directory,
2013-08-15) added a new caller which failed to respect the undocumented
assumption.
[1]: http://thread.gmane.org/gmane.comp.version-control.git/232727
Signed-off-by: Eric Sunshine <sunshine@sunshineco.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Each caller of index_name_exists() knows whether it is looking for a
directory or a file, and can avoid the unnecessary indirection of
index_name_exists() by instead calling index_dir_exists() or
index_file_exists() directly.
Invoking the appropriate search function explicitly will allow a
subsequent patch to relieve callers of the artificial burden of having
to add a trailing '/' to the pathname given to index_dir_exists().
Signed-off-by: Eric Sunshine <sunshine@sunshineco.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The code that reads from a region that mmaps an on-disk index
assumed that "int"/"short" are always 32/16 bits.
* tg/index-struct-sizes:
read-cache: use fixed width integer types
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"git mv A B" when moving a submodule A does "the right thing",
inclusing relocating its working tree and adjusting the paths in
the .gitmodules file.
* jl/submodule-mv: (53 commits)
rm: delete .gitmodules entry of submodules removed from the work tree
mv: update the path entry in .gitmodules for moved submodules
submodule.c: add .gitmodules staging helper functions
mv: move submodules using a gitfile
mv: move submodules together with their work trees
rm: do not set a variable twice without intermediate reading.
t6131 - skip tests if on case-insensitive file system
parse_pathspec: accept :(icase)path syntax
pathspec: support :(glob) syntax
pathspec: make --literal-pathspecs disable pathspec magic
pathspec: support :(literal) syntax for noglob pathspec
kill limit_pathspec_to_literal() as it's only used by parse_pathspec()
parse_pathspec: preserve prefix length via PATHSPEC_PREFIX_ORIGIN
parse_pathspec: make sure the prefix part is wildcard-free
rename field "raw" to "_raw" in struct pathspec
tree-diff: remove the use of pathspec's raw[] in follow-rename codepath
remove match_pathspec() in favor of match_pathspec_depth()
remove init_pathspec() in favor of parse_pathspec()
remove diff_tree_{setup,release}_paths
convert common_prefix() to use struct pathspec
...
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Commit 4337b58 (do not write null sha1s to on-disk index,
2012-07-28) added a safety check preventing git from writing
null sha1s into the index. The intent was to catch errors in
other parts of the code that might let such an entry slip
into the index (or worse, a tree).
Some existing repositories may have invalid trees that
contain null sha1s already, though. Until 4337b58, a common
way to clean this up would be to use git-filter-branch's
index-filter to repair such broken entries. That now fails
when filter-branch tries to write out the index.
Introduce a GIT_ALLOW_NULL_SHA1 environment variable to
relax this check and make it easier to recover from such a
history.
It is tempting to not involve filter-branch in this commit
at all, and instead require the user to manually invoke
GIT_ALLOW_NULL_SHA1=1 git filter-branch ...
to perform an index-filter on a history with trees with null
sha1s. That would be slightly safer, but requires some
specialized knowledge from the user. So let's set the
GIT_ALLOW_NULL_SHA1 variable automatically when checking out
the to-be-filtered trees. Advice on using filter-branch to
remove such entries already exists on places like
stackoverflow, and this patch makes it Just Work again on
recent versions of git.
Further commands that touch the index will still notice and
fail, unless they actually remove the broken entries. A
filter-branch whose filters do not touch the index at all
will not error out (since we complain of the null sha1 only
on writing, not when making a tree out of the index), but
this is acceptable, as we still print a loud warning, so the
problem is unlikely to go unnoticed.
Signed-off-by: Jeff King <peff@peff.net>
Reviewed-by: Jonathan Nieder <jrnieder@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Use the fixed width integer types uint16_t and uint32_t for on-disk
structures; unsigned short and unsigned int do not have a guaranteed
size.
Signed-off-by: Thomas Gummerer <t.gummerer@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Signed-off-by: Ondřej Bílka <neleai@seznam.cz>
Reviewed-by: Marc Branchaud <marcnarc@xiplink.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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* rs/discard-index-discard-array:
read-cache: free cache in discard_index
read-cache: add simple performance test
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Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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I attempted to make index_state->cache[] a "const struct cache_entry **"
to find out how existing entries in index are modified and where. The
question I have is what do we do if we really need to keep track of on-disk
changes in the index. The result is
- diff-lib.c: setting CE_UPTODATE
- name-hash.c: setting CE_HASHED
- preload-index.c, read-cache.c, unpack-trees.c and
builtin/update-index: obvious
- entry.c: write_entry() may refresh the checked out entry via
fill_stat_cache_info(). This causes "non-const struct cache_entry
*" in builtin/apply.c, builtin/checkout-index.c and
builtin/checkout.c
- builtin/ls-files.c: --with-tree changes stagemask and may set
CE_UPDATE
Of these, write_entry() and its call sites are probably most
interesting because it modifies on-disk info. But this is stat info
and can be retrieved via refresh, at least for porcelain
commands. Other just uses ce_flags for local purposes.
So, keeping track of "dirty" entries is just a matter of setting a
flag in index modification functions exposed by read-cache.c. Except
unpack-trees, the rest of the code base does not do anything funny
behind read-cache's back.
The actual patch is less valueable than the summary above. But if
anyone wants to re-identify the above sites. Applying this patch, then
this:
diff --git a/cache.h b/cache.h
index 430d021..1692891 100644
--- a/cache.h
+++ b/cache.h
@@ -267,7 +267,7 @@ static inline unsigned int canon_mode(unsigned int mode)
#define cache_entry_size(len) (offsetof(struct cache_entry,name) + (len) + 1)
struct index_state {
- struct cache_entry **cache;
+ const struct cache_entry **cache;
unsigned int version;
unsigned int cache_nr, cache_alloc, cache_changed;
struct string_list *resolve_undo;
will help quickly identify them without bogus warnings.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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* fc/do-not-use-the-index-in-add-to-index:
read-cache: trivial style cleanups
read-cache: fix wrong 'the_index' usage
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"git pack-refs" that races with new ref creation or deletion have
been susceptible to lossage of refs under right conditions, which
has been tightened up.
* mh/ref-races:
for_each_ref: load all loose refs before packed refs
get_packed_ref_cache: reload packed-refs file when it changes
add a stat_validity struct
Extract a struct stat_data from cache_entry
packed_ref_cache: increment refcount when locked
do_for_each_entry(): increment the packed refs cache refcount
refs: manage lifetime of packed refs cache via reference counting
refs: implement simple transactions for the packed-refs file
refs: wrap the packed refs cache in a level of indirection
pack_refs(): split creation of packed refs and entry writing
repack_without_ref(): split list curation and entry writing
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* rs/discard-index-discard-array:
read-cache: free cache in discard_index
read-cache: add simple performance test
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It can sometimes be useful to know whether a path in the
filesystem has been updated without going to the work of
opening and re-reading its content. We trust the stat()
information on disk already to handle index updates, and we
can use the same trick here.
This patch introduces a "stat_validity" struct which
encapsulates the concept of checking the stat-freshness of a
file. It is implemented on top of "struct stat_data" to
reuse the logic about which stat entries to trust for a
particular platform, but hides the complexity behind two
simple functions: check and update.
Signed-off-by: Michael Haggerty <mhagger@alum.mit.edu>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Add public functions fill_stat_data() and match_stat_data() to work
with it. This infrastructure will later be used to check the validity
of other types of file.
Signed-off-by: Michael Haggerty <mhagger@alum.mit.edu>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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* fc/do-not-use-the-index-in-add-to-index:
read-cache: trivial style cleanups
read-cache: fix wrong 'the_index' usage
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discard_cache doesn't have to free the array of cache entries, because
the next call of read_cache can simply reuse it, as they all operate on
the global variable the_index.
discard_index on the other hand does have to free it, because it can be
used e.g. with index_state variables on the stack, in which case a
missing free would cause an unrecoverable leak. This patch releases the
memory and removes a comment that was relevant for discard_cache but has
become outdated.
Since discard_cache is just a wrapper around discard_index nowadays, we
lose the optimization that avoids reallocation of that array within
loops of read_cache and discard_cache. That doesn't cause a performance
regression for me, however (HEAD = this patch, HEAD^ = master + p0002):
Test // HEAD^ HEAD
---------------\\-----------------------------------------------------
0002.1: read_ca// 1000 times 0.62(0.58+0.04) 0.61(0.58+0.02) -1.6%
Suggested-by: Felipe Contreras <felipe.contreras@gmail.com>
Signed-off-by: René Scharfe <rene.scharfe@lsrfire.ath.cx>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Signed-off-by: Felipe Contreras <felipe.contreras@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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We are dealing with the 'istate' index, not 'the_index'.
Signed-off-by: Felipe Contreras <felipe.contreras@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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ie_match_stat and ie_modified only derefence their struct cache_entry
pointers for reading. Add const to the parameter declaration here and
do the same for the static helper function used by them, as it's the
same there as well. This allows callers to pass in const pointers.
Signed-off-by: René Scharfe <rene.scharfe@lsrfire.ath.cx>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Reduce duplicated code between convert.c and attr.c.
* lf/read-blob-data-from-index:
convert.c: remove duplicate code
read_blob_data_from_index(): optionally return the size of blob data
attr.c: extract read_index_data() as read_blob_data_from_index()
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This allows for optionally getting the size of the returned data and
will be used in a follow-up patch.
Signed-off-by: Lukas Fleischer <git@cryptocrack.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Extract the read_index_data() function from attr.c and move it to
read-cache.c; rename it to read_blob_data_from_index() and update
the function signature of it to align better with index/cache API
functions.
This allows for reusing the function in convert.c later.
Signed-off-by: Lukas Fleischer <git@cryptocrack.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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* kb/name-hash:
name-hash.c: fix endless loop with core.ignorecase=true
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The code to keep track of what directory names are known to Git on
platforms with case insensitive filesystems can get confused upon
a hash collision between these pathnames and looped forever.
* kb/name-hash:
name-hash.c: fix endless loop with core.ignorecase=true
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Update the index format documentation to mention the v4 format.
* nd/doc-index-format:
update-index: list supported idx versions and their features
read-cache.c: use INDEX_FORMAT_{LB,UB} in verify_hdr()
index-format.txt: mention of v4 is missing in some places
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With core.ignorecase=true, name-hash.c builds a case insensitive index of
all tracked directories. Currently, the existing cache entry structures are
added multiple times to the same hashtable (with different name lengths and
hash codes). However, there's only one dir_next pointer, which gets
completely messed up in case of hash collisions. In the worst case, this
causes an endless loop if ce == ce->dir_next (see t7062).
Use a separate hashtable and separate structures for the directory index
so that each directory entry has its own next pointer. Use reference
counting to track which directory entry contains files.
There are only slight changes to the name-hash.c API:
- new free_name_hash() used by read_cache.c::discard_index()
- remove_name_hash() takes an additional index_state parameter
- index_name_exists() for a directory (trailing '/') may return a cache
entry that has been removed (CE_UNHASHED). This is not a problem as the
return value is only used to check if the directory exists (dir.c) or to
normalize casing of directory names (read-cache.c).
Getting rid of cache_entry.dir_next reduces memory consumption, especially
with core.ignorecase=false (which doesn't use that member at all).
With core.ignorecase=true, building the directory index is slightly faster
as we add / check the parent directory first (instead of going through all
directory levels for each file in the index). E.g. with WebKit (~200k
files, ~7k dirs), time spent in lazy_init_name_hash is reduced from 176ms
to 130ms.
Signed-off-by: Karsten Blees <blees@dcon.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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9d22778 (read-cache.c: write prefix-compressed names in the index -
2012-04-04) defined these. Interestingly, they were not used by
read-cache.c, or anywhere in that patch. They were used in
builtin/update-index.c later for checking supported index
versions. Use them here too.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Specifically the fields uid, gid, ctime, ino and dev are set to zero
by JGit. Other implementations, eg. Git in cygwin are allegedly also
somewhat incompatible with Git For Windows and on *nix platforms
the resolution of the timestamps may differ.
Any stat checking by git will then need to check content, which may
be very slow, particularly on Windows. Since mtime and size
is typically enough we should allow the user to tell git to avoid
checking these fields if they are set to zero in the index.
This change introduces a core.checkstat config option where the
the user can select to check all fields (default), or just size
and the whole second part of mtime (minimal).
Signed-off-by: Robin Rosenberg <robin.rosenberg@dewire.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Signed-off-by: Junio C Hamano <gitster@pobox.com>
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We do not want a link to 0{40} object stored anywhere in our objects.
* jk/maint-null-in-trees:
fsck: detect null sha1 in tree entries
do not write null sha1s to on-disk index
diff: do not use null sha1 as a sentinel value
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Assignments to errno before calling system functions that used to
matter in the old code were left behind after the code structure
changed sufficiently to make them useless.
* nd/index-errno:
read_index_from: remove bogus errno assignments
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These assignments comes from the very first commit e83c516 (Initial
revision of "git", the information manager from hell - 2005-04-07).
Back then we did not die() when errors happened so correct errno was
required.
Since 5d1a5c0 ([PATCH] Better error reporting for "git status" -
2005-10-01), read_index_from() learned to die rather than just return
-1 and these assignments became irrelevant. Remove them.
While at it, move die_errno() next to xmmap() call because it's the
mmap's error code that we care about. Otherwise if close(fd); fails,
it could overwrite mmap's errno.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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We should never need to write the null sha1 into an index
entry (short of the 1 in 2^160 chance that somebody actually
has content that hashes to it). If we attempt to do so, it
is much more likely that it is a bug, since we use the null
sha1 as a sentinel value to mean "not valid".
The presence of null sha1s in the index (which can come
from, among other things, "update-index --cacheinfo", or by
reading a corrupted tree) can cause problems for later
readers, because they cannot distinguish the literal null
sha1 from its use a sentinel value. For example, "git
diff-files" on such an entry would make it appear as if it
is stat-dirty, and until recently, the diff code assumed
such an entry meant that we should be diffing a working tree
file rather than a blob.
Ideally, we would stop such entries from entering even our
in-core index. However, we do sometimes legitimately add
entries with null sha1s in order to represent these sentinel
situations; simply forbidding them in add_index_entry breaks
a lot of the existing code. However, we can at least make
sure that our in-core sentinel representation never makes it
to disk.
To be thorough, we will test an attempt to add both a blob
and a submodule entry. In the former case, we might run into
problems anyway because we will be missing the blob object.
But in the latter case, we do not enforce connectivity
across gitlink entries, making this our only point of
enforcement. The current implementation does not care which
type of entry we are seeing, but testing both cases helps
future-proof the test suite in case that changes.
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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