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"git add x" where x that used to be a directory has become a
symbolic link to a directory misbehaved.
* rs/refresh-beyond-symlink:
read-cache: check for leading symlinks when refreshing index
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Don't add paths with leading symlinks to the index while refreshing; we
only track those symlinks themselves. We already ignore them while
preloading (see read_index_preload.c).
Reported-by: Nikolay Avdeev <avdeev@math.vsu.ru>
Signed-off-by: Rene Scharfe <l.s.r@web.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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An experiment to use two files (the base file and incremental
changes relative to it) to represent the index to reduce I/O cost
of rewriting a large index when only small part of the working tree
changes.
* nd/split-index: (32 commits)
t1700: new tests for split-index mode
t2104: make sure split index mode is off for the version test
read-cache: force split index mode with GIT_TEST_SPLIT_INDEX
read-tree: note about dropping split-index mode or index version
read-tree: force split-index mode off on --index-output
rev-parse: add --shared-index-path to get shared index path
update-index --split-index: do not split if $GIT_DIR is read only
update-index: new options to enable/disable split index mode
split-index: strip pathname of on-disk replaced entries
split-index: do not invalidate cache-tree at read time
split-index: the reading part
split-index: the writing part
read-cache: mark updated entries for split index
read-cache: save deleted entries in split index
read-cache: mark new entries for split index
read-cache: split-index mode
read-cache: save index SHA-1 after reading
entry.c: update cache_changed if refresh_cache is set in checkout_entry()
cache-tree: mark istate->cache_changed on prime_cache_tree()
cache-tree: mark istate->cache_changed on cache tree update
...
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We often represent our strings as a counted string, i.e. a pair of
the pointer to the beginning of the string and its length, and the
string may not be NUL terminated to that length.
To compare a pair of such counted strings, unpack-trees.c and
read-cache.c implement their own name_compare() functions
identically. In addition, the cache_name_compare() function in
read-cache.c is nearly identical. The only difference is when one
string is the prefix of the other string, in which case
name_compare() returns -1/+1 to show which one is longer, and
cache_name_compare() returns the difference of the lengths to show
the same information.
Unify these three functions by using the implementation from
cache_name_compare(). This does not make any difference to the
existing and future callers, as they must be paying attention only
to the sign of the returned value (and not the magnitude) because
the original implementations of these two functions return values
returned by memcmp(3) when the one string is not a prefix of the
other string, and the only thing memcmp(3) guarantees its callers is
the sign of the returned value, not the magnitude.
Signed-off-by: Jeremiah Mahler <jmmahler@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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This could be used to run the whole test suite with split
indexes. Index splitting is carried out at random. "git read-tree"
also resets the index and forces splitting at the next update.
I had a lot of headaches with the test suite, which proves it
exercises split index pretty good.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Just a (paranoid?) safety measure..
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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If $GIT_DIR is read only, we can't write $GIT_DIR/sharedindex. This
could happen when $GIT_INDEX_FILE is set to somehwere outside
$GIT_DIR.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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If you have a large work tree but only make changes in a subset, then
$GIT_DIR/index's size should be stable after a while. If you change
branches that touch something else, $GIT_DIR/index's size may grow
large that it becomes as slow as the unified index. Do --split-index
again occasionally to force all changes back to the shared index and
keep $GIT_DIR/index small.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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We know the positions of replaced entries via the replace bitmap in
"link" extension, so the "name" path does not have to be stored (it's
still in the shared index). With this, we also have a way to
distinguish additions vs replacements at load time and can catch
broken "link" extensions.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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We are sure that after merge_base_index() is done. cache-tree can
still be used with the final index. So don't destroy cache tree.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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CE_REMOVE'd entries are removed here because only parts of the code
base (unpack_trees in fact) test this bit when they look for the
presence of an entry. Leaving them may confuse the code ignores this
bit and expects to see a real entry.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The large part of this patch just follows CE_ENTRY_CHANGED
marks. replace_index_entry() is updated to update
split_index->base->cache[] as well so base->cache[] does not reference
to a freed entry.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Entries that belong to the base index should not be freed. Mark
CE_REMOVE to track them.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Make sure entry addition does not lead to unifying the index. We don't
need to explicitly keep track of new entries. If ce->index is zero,
they're new. Otherwise it's unlikely that they are new, but we'll do a
thorough check later at writing time.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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This split-index mode is designed to keep write cost proportional to
the number of changes the user has made, not the size of the work
tree. (Read cost is another matter, to be dealt separately.)
This mode stores index info in a pair of $GIT_DIR/index and
$GIT_DIR/sharedindex.<SHA-1>. sharedindex is large and unchanged over
time while "index" is smaller and updated often. Format details are in
index-format.txt, although not everything is implemented in this
patch.
Shared indexes are not automatically removed, because it's unclear if
the shared index is needed by any (even temporary) indexes by just
looking at it. After a while you'll collect stale shared indexes. The
good news is one shared index is useable for long, until
$GIT_DIR/index becomes too big and sluggish that the new shared index
must be created.
The safest way to clean shared indexes is to turn off split index
mode, so shared files are all garbage, delete them all, then turn on
split index mode again.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Also update SHA-1 after writing. If we do not do that, the second
read_index() will see "initialized" variable already set and not read
.git/index again, which is fine, except istate->sha1 now has a stale
value.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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cache entry additions, removals and modifications are separated
out. The rest of changes are still in the catch-all flag
SOMETHING_CHANGED, which would be more specific later.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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remove_marked_cache_entries() deletes entries marked with
CE_REMOVE. But if there is no such entry, do not mark the index as
"changed" because that could trigger an index update unnecessarily.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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We're running out of room for in-memory flags. But since b60e188
(Strip namelen out of ce_flags into a ce_namelen field - 2012-07-11),
we copy the namelen (first 12 bits) to ce_namelen field. So those bits
are free to use. Just make sure we do not accidentally write any
in-memory flags back.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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This function is now only used by write_locked_index(). Move it to
read-cache.c (because read-cache.c will need to be aware of
alternate_index_output later) and unexport it.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Read-only operations such as "git status" that internally refreshes
the index write out the refreshed index to the disk to optimize
future accesses to the working tree, but this could race with a
"read-write" operation that modify the index while it is running.
Detect such a race and avoid overwriting the index.
Duy raised a good point that we may need to do the same for the
normal writeout codepath, not just the "opportunistic" update
codepath. While that is true, nobody sane would be running two
simultaneous operations that are clearly write-oriented competing
with each other against the same index file. So in that sense that
can be done as a less urgent follow-up for this topic.
* ym/fix-opportunistic-index-update-race:
read-cache.c: verify index file before we opportunistically update it
wrapper.c: add xpread() similar to xread()
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Before we proceed to opportunistically update the index (often done
by an otherwise read-only operation like "git status" and "git diff"
that internally refreshes the index), we must verify that the
current index file is the same as the one that we read earlier
before we took the lock on it, in order to avoid a possible race.
In the example below git-status does "opportunistic update" and
git-rebase updates the index, but the race can happen in general.
1. process A calls git-rebase (or does anything that uses the index)
2. process A applies 1st commit
3. process B calls git-status (or does anything that updates the index)
4. process B reads index
5. process A applies 2nd commit
6. process B takes the lock, then overwrites process A's changes.
7. process A applies 3rd commit
As an end result the 3rd commit will have a revert of the 2nd commit.
When process B takes the lock, it needs to make sure that the index
hasn't changed since step 4.
Signed-off-by: Yiannis Marangos <yiannis.marangos@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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"merge-recursive" was broken in 1.7.7 era and stopped working in an
empty (temporary) working tree, when there are renames involved.
This has been corrected.
* bk/refresh-missing-ok-in-merge-recursive:
merge-recursive.c: tolerate missing files while refreshing index
read-cache.c: extend make_cache_entry refresh flag with options
read-cache.c: refactor --ignore-missing implementation
t3030-merge-recursive: test known breakage with empty work tree
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Replace open-coded reallocation with ALLOC_GROW() macro.
* dd/use-alloc-grow:
sha1_file.c: use ALLOC_GROW() in pretend_sha1_file()
read-cache.c: use ALLOC_GROW() in add_index_entry()
builtin/mktree.c: use ALLOC_GROW() in append_to_tree()
attr.c: use ALLOC_GROW() in handle_attr_line()
dir.c: use ALLOC_GROW() in create_simplify()
reflog-walk.c: use ALLOC_GROW()
replace_object.c: use ALLOC_GROW() in register_replace_object()
patch-ids.c: use ALLOC_GROW() in add_commit()
diffcore-rename.c: use ALLOC_GROW()
diff.c: use ALLOC_GROW()
commit.c: use ALLOC_GROW() in register_commit_graft()
cache-tree.c: use ALLOC_GROW() in find_subtree()
bundle.c: use ALLOC_GROW() in add_to_ref_list()
builtin/pack-objects.c: use ALLOC_GROW() in check_pbase_path()
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* tg/index-v4-format:
read-cache: add index.version config variable
test-lib: allow setting the index format version
introduce GIT_INDEX_VERSION environment variable
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Signed-off-by: Dmitry S. Dolzhenko <dmitrys.dolzhenko@yandex.ru>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Borrow the bitmap index into packfiles from JGit to speed up
enumeration of objects involved in a commit range without having to
fully traverse the history.
* jk/pack-bitmap: (26 commits)
ewah: unconditionally ntohll ewah data
ewah: support platforms that require aligned reads
read-cache: use get_be32 instead of hand-rolled ntoh_l
block-sha1: factor out get_be and put_be wrappers
do not discard revindex when re-preparing packfiles
pack-bitmap: implement optional name_hash cache
t/perf: add tests for pack bitmaps
t: add basic bitmap functionality tests
count-objects: recognize .bitmap in garbage-checking
repack: consider bitmaps when performing repacks
repack: handle optional files created by pack-objects
repack: turn exts array into array-of-struct
repack: stop using magic number for ARRAY_SIZE(exts)
pack-objects: implement bitmap writing
rev-list: add bitmap mode to speed up object lists
pack-objects: use bitmaps when packing objects
pack-objects: split add_object_entry
pack-bitmap: add support for bitmap indexes
documentation: add documentation for the bitmap format
ewah: compressed bitmap implementation
...
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* nd/reset-intent-to-add:
reset: support "--mixed --intent-to-add" mode
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Allow "git cmd path/", when the 'path' is where a submodule is
bound to the top-level working tree, to match 'path', despite the
extra and unnecessary trailing slash.
* nd/submodule-pathspec-ending-with-slash:
clean: use cache_name_is_other()
clean: replace match_pathspec() with dir_path_match()
pathspec: pass directory indicator to match_pathspec_item()
match_pathspec: match pathspec "foo/" against directory "foo"
dir.c: prepare match_pathspec_item for taking more flags
pathspec: rename match_pathspec_depth() to match_pathspec()
pathspec: convert some match_pathspec_depth() to dir_path_match()
pathspec: convert some match_pathspec_depth() to ce_path_match()
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Allow "merge-recursive" to work in an empty (temporary) working
tree again when there are renames involved, correcting an old
regression in 1.7.7 era.
* bk/refresh-missing-ok-in-merge-recursive:
merge-recursive.c: tolerate missing files while refreshing index
read-cache.c: extend make_cache_entry refresh flag with options
read-cache.c: refactor --ignore-missing implementation
t3030-merge-recursive: test known breakage with empty work tree
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This helps reduce the number of match_pathspec_depth() call sites and
show how match_pathspec_depth() is used.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Convert the make_cache_entry boolean 'refresh' argument to a more
general 'refresh_options' argument. Pass the value through to the
underlying refresh_cache_ent call. Add option CE_MATCH_REFRESH to
enable stat refresh. Update call sites to use the new signature.
Signed-off-by: Brad King <brad.king@kitware.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Move lstat ENOENT handling from refresh_index to refresh_cache_ent and
activate it with a new CE_MATCH_IGNORE_MISSING option. This will allow
other call paths into refresh_cache_ent to use the feature.
Signed-off-by: Brad King <brad.king@kitware.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Add a config variable that allows setting the default index version when
initializing a new index file. Similar to the GIT_INDEX_VERSION
environment variable this only affects new index files.
Signed-off-by: Thomas Gummerer <t.gummerer@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Respect a GIT_INDEX_VERSION environment variable, when a new index is
initialized. Setting the environment variable will not cause existing
index files to be converted to another format, but will only affect
newly written index files. This can be used to initialize repositories
with index-v4.
Helped-by: Junio C Hamano <gitster@pobox.com>
Signed-off-by: Thomas Gummerer <t.gummerer@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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When --mixed is used, entries could be removed from index if the
target ref does not have them. When "reset" is used in preparation for
commit spliting (in a dirty worktree), it could be hard to track what
files to be added back. The new option --intent-to-add simplifies it
by marking all removed files intent-to-add.
Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
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Commit d60c49c (read-cache.c: allow unaligned mapping of the
index file, 2012-04-03) introduced helpers to access
unaligned data. However, we already have get_be32, which has
a few advantages:
1. It's already written, so we avoid duplication.
2. It's probably faster, since it does the endian
conversion and the alignment fix at the same time.
3. The get_be32 code is well-tested, having been in
block-sha1 for a long time. By contrast, our custom
helpers were probably almost never used, since the user
needed to manually define a macro to enable them.
We have to add a get_be16 implementation to the existing
get_be32, but that is very simple to do.
Signed-off-by: Jeff King <peff@peff.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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When cache_entry structs are removed from index_state.cache, they are not
properly freed. Freeing those entries wasn't possible before because we
couldn't remove them from index_state.name_hash.
Now that we _do_ remove the entries from name_hash, we can also free them.
Add 'free(cache_entry)' to all call sites of name-hash.c::remove_name_hash
in read-cache.c (we could free() directly in remove_name_hash(), but
name-hash.c isn't concerned with cache_entry allocation at all).
Accessing a cache_entry after removing it from the index is now no longer
allowed, as the memory has been freed. The following functions need minor
fixes (typically by copying ce->name before use):
- builtin/rm.c::cmd_rm
- builtin/update-index.c::do_reupdate
- read-cache.c::read_index_unmerged
- resolve-undo.c::unmerge_index_entry_at
Signed-off-by: Karsten Blees <blees@dcon.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The new hashmap implementation supports remove, so really remove unused
cache entries from the name hashmap instead of just marking them.
The CE_UNHASHED flag and CE_STATE_MASK are no longer needed.
Keep the CE_HASHED flag to prevent adding entries twice.
Signed-off-by: Karsten Blees <blees@dcon.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Clean up the internal of the name-hash mechanism used to work
around case insensitivity on some filesystems to cleanly fix a
long-standing API glitch where the caller of cache_name_exists()
that ask about a directory with a counted string was required to
have '/' at one location past the end of the string.
* es/name-hash-no-trailing-slash-in-dirs:
dir: revert work-around for retired dangerous behavior
name-hash: stop storing trailing '/' on paths in index_state.dir_hash
employ new explicit "exists in index?" API
name-hash: refactor polymorphic index_name_exists()
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Earlier we started rejecting an attempt to add 0{40} object name to
the index and to tree objects, but it sometimes is necessary to
allow so to be able to use tools like filter-branch to correct such
broken tree objects.
* jk/write-broken-index-with-nul-sha1:
write_index: optionally allow broken null sha1s
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When 5102c617 (Add case insensitivity support for directories when using
git status, 2010-10-03) added directories to the name-hash there was
only a single hash table in which both real cache entries and leading
directory prefixes were registered. To distinguish between the two types
of entries, directories were stored with a trailing '/'.
2092678c (name-hash.c: fix endless loop with core.ignorecase=true,
2013-02-28), however, moved directories to a separate hash table
(index_state.dir_hash) but retained the (now) redundant trailing '/',
thus callers continue to bear the burden of ensuring the slash's
presence before searching the index for a directory. Eliminate this
redundancy by storing paths in the dir-hash without the trailing '/'.
An important benefit of this change is that it eliminates undocumented
and dangerous behavior of dir.c:directory_exists_in_index_icase() in
which it assumes not only that it can validly access one character
beyond the end of its incoming directory argument, but also that that
character will unconditionally be a '/'. This perilous behavior was
"tolerated" because the string passed in by its lone caller always had a
'/' in that position, however, things broke [1] when 2eac2a4c (ls-files
-k: a directory only can be killed if the index has a non-directory,
2013-08-15) added a new caller which failed to respect the undocumented
assumption.
[1]: http://thread.gmane.org/gmane.comp.version-control.git/232727
Signed-off-by: Eric Sunshine <sunshine@sunshineco.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Each caller of index_name_exists() knows whether it is looking for a
directory or a file, and can avoid the unnecessary indirection of
index_name_exists() by instead calling index_dir_exists() or
index_file_exists() directly.
Invoking the appropriate search function explicitly will allow a
subsequent patch to relieve callers of the artificial burden of having
to add a trailing '/' to the pathname given to index_dir_exists().
Signed-off-by: Eric Sunshine <sunshine@sunshineco.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The code that reads from a region that mmaps an on-disk index
assumed that "int"/"short" are always 32/16 bits.
* tg/index-struct-sizes:
read-cache: use fixed width integer types
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"git mv A B" when moving a submodule A does "the right thing",
inclusing relocating its working tree and adjusting the paths in
the .gitmodules file.
* jl/submodule-mv: (53 commits)
rm: delete .gitmodules entry of submodules removed from the work tree
mv: update the path entry in .gitmodules for moved submodules
submodule.c: add .gitmodules staging helper functions
mv: move submodules using a gitfile
mv: move submodules together with their work trees
rm: do not set a variable twice without intermediate reading.
t6131 - skip tests if on case-insensitive file system
parse_pathspec: accept :(icase)path syntax
pathspec: support :(glob) syntax
pathspec: make --literal-pathspecs disable pathspec magic
pathspec: support :(literal) syntax for noglob pathspec
kill limit_pathspec_to_literal() as it's only used by parse_pathspec()
parse_pathspec: preserve prefix length via PATHSPEC_PREFIX_ORIGIN
parse_pathspec: make sure the prefix part is wildcard-free
rename field "raw" to "_raw" in struct pathspec
tree-diff: remove the use of pathspec's raw[] in follow-rename codepath
remove match_pathspec() in favor of match_pathspec_depth()
remove init_pathspec() in favor of parse_pathspec()
remove diff_tree_{setup,release}_paths
convert common_prefix() to use struct pathspec
...
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Commit 4337b58 (do not write null sha1s to on-disk index,
2012-07-28) added a safety check preventing git from writing
null sha1s into the index. The intent was to catch errors in
other parts of the code that might let such an entry slip
into the index (or worse, a tree).
Some existing repositories may have invalid trees that
contain null sha1s already, though. Until 4337b58, a common
way to clean this up would be to use git-filter-branch's
index-filter to repair such broken entries. That now fails
when filter-branch tries to write out the index.
Introduce a GIT_ALLOW_NULL_SHA1 environment variable to
relax this check and make it easier to recover from such a
history.
It is tempting to not involve filter-branch in this commit
at all, and instead require the user to manually invoke
GIT_ALLOW_NULL_SHA1=1 git filter-branch ...
to perform an index-filter on a history with trees with null
sha1s. That would be slightly safer, but requires some
specialized knowledge from the user. So let's set the
GIT_ALLOW_NULL_SHA1 variable automatically when checking out
the to-be-filtered trees. Advice on using filter-branch to
remove such entries already exists on places like
stackoverflow, and this patch makes it Just Work again on
recent versions of git.
Further commands that touch the index will still notice and
fail, unless they actually remove the broken entries. A
filter-branch whose filters do not touch the index at all
will not error out (since we complain of the null sha1 only
on writing, not when making a tree out of the index), but
this is acceptable, as we still print a loud warning, so the
problem is unlikely to go unnoticed.
Signed-off-by: Jeff King <peff@peff.net>
Reviewed-by: Jonathan Nieder <jrnieder@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Use the fixed width integer types uint16_t and uint32_t for on-disk
structures; unsigned short and unsigned int do not have a guaranteed
size.
Signed-off-by: Thomas Gummerer <t.gummerer@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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